11 — List all dataset titles alphabetically with row numbers
Source: 11_datasets_alphabetical.cypher
| idx | dataset |
|---|---|
| 1 | A molecular single-cell lung atlas of lethal COVID-19 |
| 2 | A proximal-to-distal survey of healthy adult human small intestine and colon epithelium by single-cell transcriptomics |
| 3 | A scRNA-seq atlas of immune cells at the CNS borders |
| 4 | A single-cell multi-omic atlas spanning the adult rhesus macaque brain |
| 5 | A transcriptomic atlas of the mouse cerebellum |
| 6 | AIDA Phase 1 Data Freeze v2: Chinese, Indian, Japanese, Korean, Malay, and Thai donors in Japan, Singapore, South Korea, Thailand, and India |
| 7 | Adult mouse cortical cell taxonomy revealed by single cell transcriptomics |
| 8 | Airway |
| 9 | All - A single-cell transcriptomic atlas characterizes ageing tissues in the mouse |
| 10 | All Cells - snRNA-seq |
| 11 | All cell types of human eye |
| 12 | All cells types from scRNA-seq of human primary sclerosing cholangitis patients and healthy controls |
| 13 | All cells types from snRNA-seq of human primary sclerosing cholangitis patients and healthy controls |
| 14 | All cells with electrophysiological and morphological recordings |
| 15 | All cells with electrophysiological recordings |
| 16 | All cells with morphological recordings |
| 17 | All major cell types in adult human retina |
| 18 | All-snATAC-Spatial multi-omic map of human myocardial infarction |
| 19 | All-snRNA-Spatial multi-omic map of human myocardial infarction |
| 20 | Amacrine cells of the human fovea and peripheral retina |
| 21 | An integrated cell atlas of the human lung in health and disease (core) |
| 22 | An integrated cell atlas of the human lung in health and disease (full) |
| 23 | An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types |
| 24 | Autoimmunity PBMCs |
| 25 | B Cell/Plasmablast Sub_clusters of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets |
| 26 | B cells -- CV19 infection, vaccination and HC |
| 27 | Bipolar cells of the human fovea and peripheral retina |
| 28 | Brain non-myeloid cells - A single-cell transcriptomic atlas characterizes ageing tissues in the mouse |
| 29 | BrainAgingSpatialAtlas_Imputed |
| 30 | BrainAgingSpatialAtlas_MERFISH |
| 31 | BrainAgingSpatialAtlas_MERFISH_LPS |
| 32 | BrainAgingSpatialAtlas_snRNAseq |
| 33 | CGE-derived interneurons integrated with 10X sequencing MOp data |
| 34 | COMBAT project: single cell gene expression data from COVID-19, sepsis and flu patient PBMCs |
| 35 | COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets |
| 36 | Central Cornea |
| 37 | Circulating Immune cells -- CV19 infection, vaccination and HC |
| 38 | Classical Monocyte sub_clusters of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets |
| 39 | Colon |
| 40 | DCM/ACM heart cell atlas: All cells |
| 41 | DNA Methylation (CGN) Atlas of the Mouse Brain at Single-Cell Resolution |
| 42 | DNA methylation of brain cells -- CG methylation of Excitatory Neurons (snmC-seq) |
| 43 | DNA methylation of brain cells -- CG methylation of Inhibitory and Subcortical Neurons (snm3C-seq) |
| 44 | DNA methylation of brain cells -- CG methylation of Inhibitory and Subcortical Neurons (snmC-seq) |
| 45 | DNA methylation of brain cells -- CG methylation of Non-neuronal Cells (snm3C-seq) |
| 46 | DNA methylation of brain cells -- CG methylation of Non-neuronal Cells (snmC-seq) |
| 47 | DNA methylation of brain cells -- non-CG methylation of Excitatory Neurons (snm3C-seq) |
| 48 | DNA methylation of brain cells -- non-CG methylation of Excitatory Neurons (snmC-seq) |
| 49 | DNA methylation of brain cells -- non-CG methylation of Inhibitory and Subcortical Neurons (snm3C-seq) |
| 50 | DNA methylation of brain cells -- non-CG methylation of Inhibitory and Subcortical Neurons (snmC-seq) |
| 51 | DNA methylation of brain cells -- non-CG methylation of Non-neuronal Cells (snmC-seq) |
| 52 | Discovery (DIS) set of human colorectal tumor: Epithelial |
| 53 | Dissection: Angular gyrus (AnG) |
| 54 | Dissection: Anterior cingulate cortex (ACC) |
| 55 | Dissection: Dorsolateral prefrontal cortex (DFC) |
| 56 | Dissection: Middle temporal gyrus (MTG) |
| 57 | Dissection: Primary auditory cortex(A1) |
| 58 | Dissection: Primary motor cortex (M1) |
| 59 | Dissection: Primary somatosensory cortex (S1) |
| 60 | Dissection: Primary visual cortex(V1) |
| 61 | Evolution of cellular diversity in primary motor cortex of human - non-neurons |
| 62 | Excitatory neurons integrated with 10X sequencing MOp data |
| 63 | Fetal Human Gut (6-11 PCW) |
| 64 | Fetal kidney dataset: full |
| 65 | Frontal cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains |
| 66 | Frontal cortex samples from C9-FTD and age matched control brains |
| 67 | HBCA - epithelial |
| 68 | HBCA - global |
| 69 | HBCA - stroma |
| 70 | Horizontal cells of the human fovea and peripheral retina |
| 71 | Human Astrocytes 10x scRNA-seq |
| 72 | Human CellCards Multi-Study CellRef 1.0 Atlas |
| 73 | Human DA Neurons 10x scRNA-seq |
| 74 | Human Endothelial cells 10x scRNA-seq |
| 75 | Human Human Microglia 10x scRNA-seq |
| 76 | Human Multiple Cortical Areas SMART-seq |
| 77 | Human Non-DA Neurons 10x scRNA-seq |
| 78 | Human Nurr-Negative Nuclei 10x scRNA-seq |
| 79 | Human Nurr-Positive Nuclei 10x scRNA-seq |
| 80 | Human OPC Cells 10x scRNA-seq |
| 81 | Human Oligodendrocytes 10x scRNA-seq |
| 82 | Human kidney cortex snATAC-seq data from donors with and without diabetic kidney disease |
| 83 | Human kidney cortex snRNA-seq data from donors with and without diabetic kidney disease |
| 84 | HypoMap – a unified single cell gene expression atlas of the murine hypothalamus |
| 85 | Ileum |
| 86 | Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19 |
| 87 | Individual Single-Cell RNA-seq PBMC Data from Arunachalam et al. |
| 88 | Individual Single-Cell RNA-seq PBMC Data from Guo et al. |
| 89 | Individual Single-Cell RNA-seq PBMC Data from Lee et al. |
| 90 | Individual Single-Cell RNA-seq PBMC Data from Schulte-Schrepping et al. |
| 91 | Individual Single-Cell RNA-seq PBMC Data from Wilk et al. |
| 92 | Integrated HBCA |
| 93 | Integrated Single-nucleus and Single-cell RNA-seq of the Adult Human Kidney |
| 94 | Integrated data |
| 95 | Iris |
| 96 | Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients |
| 97 | Lens |
| 98 | M cells -- CV19 infection, vaccination and HC |
| 99 | MGE-derived interneurons integrated with 10X sequencing MOp data |
| 100 | Mature kidney dataset: full |
| 101 | Molecular, spatial and projection diversity of neurons in primary motor cortex revealed by in situ single-cell transcriptomics |
| 102 | Multiomics single-cell analysis of human pancreatic islets reveals novel cellular states in health and type 1 diabetes |
| 103 | Non-neuronal cells of the human fovea and peripheral retina |
| 104 | Non-neuronal cells — An Atlas of Gene Regulatory Elements in Adult Mouse Cerebrum. |
| 105 | Occipital cortex samples from C9-ALS, C9-ALS/FTD and age matched control brains |
| 106 | Occipital cortex samples from C9-FTD and age matched control brains |
| 107 | Organoid - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution |
| 108 | PBMC |
| 109 | PBMCs |
| 110 | Paediatric Human Gut (4-14y) |
| 111 | Photoreceptor cells of the human fovea and peripheral retina |
| 112 | Placenta Infection |
| 113 | Platelet sub_clusters of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets |
| 114 | Retina |
| 115 | Retinal ganglion cells of the human fovea and peripheral retina |
| 116 | Shared and distinct transcriptomic cell types across neocortical areas |
| 117 | Single Cell Sequencing of Human PBMCs in Clonal Hematopoeisis of Indeterminant Potential |
| 118 | Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney - ATACseq |
| 119 | Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney - RNAseq |
| 120 | Single-cell RNA-seq analysis reveals cell subsets and gene signatures associated with Rheumatoid Arthritis Disease Activity |
| 121 | Single-cell RNA-seq for all cortical & hippocampal regions (10x) |
| 122 | Single-cell RNA-seq for all cortical & hippocampal regions (SMART-Seq v4) |
| 123 | Single-cell RNA-seq of the Adult Human Kidney (Version 1.0) |
| 124 | Single-cell RNA-seq of the Adult Human Kidney (Version 1.5) |
| 125 | Single-cell atlas of peripheral immune response to SARS-CoV-2 infection |
| 126 | Single-cell multi-omics analysis of the immune response in COVID-19 |
| 127 | Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy |
| 128 | Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming |
| 129 | Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.0) |
| 130 | Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5) |
| 131 | Single-nucleus transcriptome data from the dlPFC: Human |
| 132 | Single-soma transcriptomics of tangle-bearing neurons in Alzheimer’s disease - Excitatory |
| 133 | Skin |
| 134 | Supercluster: CGE-derived interneurons |
| 135 | Supercluster: Deep layer (non-IT) excitatory neurons |
| 136 | Supercluster: IT-projecting excitatory neurons |
| 137 | Supercluster: MGE-derived interneurons |
| 138 | Supercluster: Non-neuronal cells |
| 139 | Survey of human embryonic development |
| 140 | Survey of human embryonic development (1 million cells subset) |
| 141 | T Cell and NK Cell Subtypes of COVID-19 Immune Altas: Integration of 5 public COVID-19 PBMC single-cell datasets |
| 142 | T cells -- CV19 infection, vaccination and HC |
| 143 | TI epithelial |
| 144 | TI immune |
| 145 | TI stromal |
| 146 | Tabula Sapiens - All Cells |
| 147 | Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Adaptive Cells |
| 148 | Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19: Innate Cells |
| 149 | Total - Cells of the human intestinal tract mapped across space and time |
| 150 | Trabecular Meshwork and Corneal Scleral wedge |
| 151 | Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19 |
| 152 | UMAP visualization of all 12 datasets |
| 153 | VAL and DIS datasets: Non-Epithelial |
| 154 | Validation (Val) set of human colorectal tumor: Epithelial |
| 155 | WB_MERFISH_animal1_coronal |
| 156 | WB_MERFISH_animal2_coronal |
| 157 | WB_MERFISH_animal3_sagittal |
| 158 | WB_MERFISH_animal4_sagittal |
| 159 | Whole Taxonomy - DLPFC: Seattle Alzheimer's Disease Atlas (SEA-AD) |
| 160 | Whole Taxonomy - MTG: Seattle Alzheimer's Disease Atlas (SEA-AD) |
| 161 | ccRCC - Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response |
| 162 | chRCC - Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response |
| 163 | colon epithelial |
| 164 | colon immune |
| 165 | colon stromal |
| 166 | innate T cells -- CV19 infection, vaccination and HC |
| 167 | multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples |
| 168 | normal - Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response |
| 169 | nygc multimodal pbmc |
| 170 | scRNA-seq of foveal and parafoveal retina |
| 171 | snRNA-seq data for human cerebella from 9-12 developmental stages |
| 172 | snRNA-seq data for mouse cerebella from 9-12 developmental stages |
| 173 | snRNA-seq of human anterior and posterior hippocampus |
| 174 | snRNA-seq of human retina - all cells |
| 175 | snmCT-seq of human dorsolateral prefrontal cortex (Brodmann area 46) |
| 176 | white matter - all cells |