Slot: cell_fullname
_This MUST be the full-length name for the biological entity listed in cell_label by the author. (If the value in cell_label is the full-length term, this field will contain the same value.) _
_NOTE: any reserved word used in the field 'cell_label' MUST match the value of this field. _
__
_EXAMPLE 1: Given the matching terms 'LC' and 'luminal cell' used to annotate the same cell(s), then users could use either terms as values in the field 'cell_label'. However, the abbreviation 'LC' CANNOT be provided in the field 'cell_fullname'. _
__
EXAMPLE 2: Either the abbreviation 'AC' or the full-length term intended by the author 'GABAergic amacrine cell' MAY be placed in the field 'cell_label', but as full-length term naming this biological entity, 'GABAergic amacrine cell' MUST be placed in the field 'cell_fullname'.
URI: skos:preflabel
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| BicanAnnotation | no | |
| Annotation | A collection of fields recording a cell type/class/state annotation on some s... | no |
Properties
- Range: String
Identifier and Mapping Information
Schema Source
- from schema: https://cellular-semantics.sanger.ac.uk/ontology/CAS
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | skos:preflabel |
| native | cell_annotation_schema:cell_fullname |
LinkML Source
name: cell_fullname
description: "This MUST be the full-length name for the biological entity listed in\
\ `cell_label` by the author. (If the value in `cell_label` is the full-length term,\
\ this field will contain the same value.) \nNOTE: any reserved word used in the\
\ field 'cell_label' MUST match the value of this field. \n\nEXAMPLE 1: Given the\
\ matching terms 'LC' and 'luminal cell' used to annotate the same cell(s), then\
\ users could use either terms as values in the field 'cell_label'. However, the\
\ abbreviation 'LC' CANNOT be provided in the field 'cell_fullname'. \n\nEXAMPLE\
\ 2: Either the abbreviation 'AC' or the full-length term intended by the author\
\ 'GABAergic amacrine cell' MAY be placed in the field 'cell_label', but as full-length\
\ term naming this biological entity, 'GABAergic amacrine cell' MUST be placed in\
\ the field 'cell_fullname'."
from_schema: https://cellular-semantics.sanger.ac.uk/ontology/CAS
rank: 1000
slot_uri: skos:preflabel
alias: cell_fullname
domain_of:
- Annotation
range: string