| algorithm_name |
The name of the algorithm used |
| algorithm_repo_url |
This field denotes the URL of the version control repository associated with ... |
| algorithm_version |
The version of the algorithm used (if applicable) |
| annotation_method |
The method used for creating the cell annotations |
| annotations |
|
| author_annotation_fields |
A dictionary of author defined key value pairs annotating the cell set |
| author_contact |
Primary author's contact |
| author_list |
This field stores a list of users who are included in the project as collabor... |
| author_name |
Primary author's name |
| automated_annotation |
|
| canonical_marker_genes |
A list of gene names considered to be canonical markers for the biological en... |
| cap_dataset_url |
A persistent URL of the dataset on CAP |
| cap_publication_description |
The description of the publication on CAP |
| cap_publication_title |
The title of the publication on CAP (i |
| cap_publication_url |
A persistent URL of the publication on CAP |
| category_cell_ontology_exists |
Decision by user whether this biological entity exists in the current Cell On... |
| category_cell_ontology_term |
The human-readable name assigned to the value of 'category_cell_ontology_term... |
| category_cell_ontology_term_id |
The ID from either the Cell Ontology or from some ontology that extends it by... |
| category_fullname |
Any term denoting a biological entity which the author associates as the near... |
| cell_fullname |
This MUST be the full-length name for the biological entity listed in `cell_l... |
| cell_ids |
Cell barcode sequences/UUIDs used to uniquely identify the cells within the A... |
| cell_label |
This denotes any free-text term which the author uses to annotate cells, i |
| cell_ontology_assessment |
Free-text field for researchers to express disagreements with any aspect of t... |
| cell_ontology_exists |
Decision by user whether this biological entity exists in the current Cell On... |
| cell_ontology_term |
This MUST be the human-readable name assigned to the value of 'cell_ontology_... |
| cell_ontology_term_id |
This MUST be a term from either the Cell Ontology (https://www |
| cellannotation_schema_version |
The schema version, the cell annotation open standard |
| cellannotation_timestamp |
The timestamp of all cell annotations published (per dataset) |
| cellannotation_url |
A persistent URL of all cell annotations published (per dataset) |
| cellannotation_version |
The version for all cell annotations published (per dataset) |
| datestamp |
Time and date review was last edited |
| description |
The description of the dataset |
| explanation |
Free-text review of annotation |
| id |
|
| labelset |
The unique name of the set of cell annotations |
| labelsets |
|
| marker_gene_evidence |
Gene names explicitly used as evidence, which MUST be in the matrix of the An... |
| matrix_file_id |
A resolvable ID for a cell by gene matrix file in the form namespace:accessio... |
| name |
name of annotation key |
| orcid |
Primary author's orcid |
| publication_timestamp |
The timestamp of the CAP publication |
| publication_version |
The (latest) version of the CAP publication |
| rationale |
The free-text rationale which users provide as justification/evidence for the... |
| rationale_dois |
|
| reference_location |
This field denotes a valid URL of the annotated dataset that was the source o... |
| review |
Reviewer's verdict on the annotation |
| reviewer |
Review Author |
| reviews |
|
| synonyms |
List of synonyms |
| title |
The title of the dataset |