Slot: marker_gene_context

The context in which the marker genes given in the marker gene evidence field should be tested. Context should consist of a list of field_name:value. Where field name = an obs field name. The obs field name may be further broken down into labelset.field name, where a field is attached to a specific labelset.

__

URI: cell_annotation_schema:marker_gene_context

Properties

• Range: String

• Multivalued: True

Identifier and Mapping Information

Schema Source

• from schema: https://cellular-semantics.sanger.ac.uk/ontology/CAS

Mappings

Mapping Type	Mapped Value
self	cell_annotation_schema:marker_gene_context
native	cell_annotation_schema:marker_gene_context

LinkML Source

name: marker_gene_context
description: 'The context in which the marker genes given in the marker gene evidence
  field should be tested. Context should consist of a list of field_name:value.  Where
  field name = an obs field name.   The obs field name may be further broken down
  into labelset.field name, where a field is attached to a  specific labelset.

  '
from_schema: https://cellular-semantics.sanger.ac.uk/ontology/CAS
rank: 1000
alias: marker_gene_context
range: string
multivalued: true